As a non-profit organization, the Chinese Professional Baseball League is led by the Commissioner who oversees the entire operation of the League, as well as conduct domestic and international orders on behalf of the League. The League's organizational structure and its governing tasks are as followed:
- Office of Commissioner
- Commissioner: Tsai Chi-Chang
- Arbitration Committee
- Secretary General
- Secretary General: Yang Ching-Lung
- Deputy Secretary General: Wang Huei-Min, Tsai Ke-Sih
- Ruling Committee
- Security Division
- Player conduct
- Stadium & Hotel safety measurements
- General Management
- Human resources
- Labor relations
- Legal advise
- Promotion & Marketing
- News and Public Relations
- Promotional Activities
- Sales and Sponsorships
- Information and Multimedia
- Arts and Creativities
- Baseball Operations
- Scoring and Statistics
- Stadium Public Address
- Facility Management
- Ticketing
- Technical Committee
- Umpires & Special rules
- Grounds Crew
- Finance & Controller
- Accountant & Financial management
- Budget & Controller
- Strategic Planning
- Licensing & Authorization
- League constitution, rules & regulations
- International Affairs
- International contact
- International agreement & tournament